func TestIntervalSource(t *testing.T) {
var a Relatable
a = parsers.NewInterval("chr1", 1234, 5678, bytes.Split([]byte("chr1\t1234\t5678"), []byte("\t")), 0, nil)
a.SetSource(222)
if a.Source() != 222 {
t.Error("expected 222, got", a.Source())
}
}
// return an interval using the info from the tabix index
func newgeneric(fields [][]byte, chromCol int, startCol int, endCol int, zeroBased bool) (*parsers.Interval, error) {
s, err := strconv.Atoi(unsafeString(fields[startCol]))
if err != nil {
return nil, err
}
if !zeroBased {
s -= 1
}
e, err := strconv.Atoi(unsafeString(fields[endCol]))
if err != nil {
return nil, err
}
return parsers.NewInterval(string(fields[chromCol]), uint32(s), uint32(e), fields, uint32(0), nil), nil
}
func TestInterval(t *testing.T) {
a := parsers.NewInterval("chr1", 1234, 5678, bytes.Split([]byte("chr1\t1234\t5678"), []byte("\t")), 0, nil)
if a.Chrom() != "chr1" {
t.Error("expected \"chr1\", got", a.Chrom())
}
if a.Start() != 1234 {
t.Error("expected start = 1234, got", a.Start())
}
if a.End() != 5678 {
t.Error("expected start = 5678, got", a.End())
}
s := fmt.Sprintf("%v", a)
if len(s) == 0 {
t.Error("bad String")
}
}
