func main() {
br := bufio.NewReader(os.Stdin)
line, err := br.ReadString('\n')
if err != nil {
log.Fatal(err)
}
rna := line[:len(line)-1]
prot, err := gene.Translate(rna)
fmt.Println(prot)
if err != nil {
log.Fatal(err)
}
}
func main() {
br := bufio.NewReader(os.Stdin)
line, err := br.ReadString('\n')
if err != nil {
log.Fatal(err)
}
dna := strings.TrimSpace(line)
introns := []string{}
for {
line, err = br.ReadString('\n')
if err == io.EOF {
break
} else if err != nil {
log.Fatal(err)
}
introns = append(introns, strings.TrimSpace(line))
}
spliced := make([]byte, 0, len(dna))
r := regexp.MustCompile(strings.Join(introns, "|"))
begin := 0
for {
loc := r.FindStringIndex(dna[begin:])
if loc == nil {
spliced = append(spliced, dna[begin:]...)
break
}
spliced = append(spliced, dna[begin:begin+loc[0]]...)
begin += loc[1]
}
for i, b := range spliced {
if b == 'T' {
spliced[i] = 'U'
}
}
prot, _ := gene.Translate(string(spliced))
fmt.Println(prot)
}
func main() {
br := bufio.NewReader(os.Stdin)
line, err := br.ReadString('\n')
if err != nil {
log.Fatal(err)
}
dna := strings.TrimSpace(line)
rnaBytes := []byte(dna)
for i, b := range rnaBytes {
if b == 'T' {
rnaBytes[i] = 'U'
}
}
rna := string(rnaBytes)
revRna := strings.Replace(gene.DnaReverseComplement(dna), "T", "U", -1)
c := gene.CodonsOf('M')
if len(c) != 1 {
panic(fmt.Sprintf("Unexpected start codons: %v", c))
}
startCodon := c[0]
seen := make(map[string]bool)
for _, s := range []string{rna, revRna} {
for offset := 0; offset < 3; offset++ {
for i := offset; i < len(s)-2; i += 3 {
if s[i:i+3] == startCodon {
protein, err := gene.Translate(s[i:])
if err == nil && !seen[protein] {
fmt.Println(protein)
seen[protein] = true
}
}
}
}
}
}
