/
levmar.go
242 lines (200 loc) · 5.5 KB
/
levmar.go
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package problems
/*
#cgo LDFLAGS: -L/usr/lib -Llevmar-2.6 -llevmar -llapack -lblas -lf2c -lm
#include "levmar_h.h"
#include "stack.h"
*/
import "C"
import (
// "fmt"
. "github.com/verdverm/go-pge/problems"
expr "github.com/verdverm/go-symexpr"
"reflect"
"unsafe"
)
type C_double C.double
func MakeCDouble(f float64) C_double {
return C_double(C.double(f))
}
type callback_data struct {
Train []*PointSet
Test []*PointSet
E expr.Expr
J []expr.Expr
S [][]int
Coeff []float64
Task ExprProblemType
}
func LevmarExpr(e expr.Expr, searchDim int, task ExprProblemType, guess []float64, train, test []*PointSet) []float64 {
ps := train[0].NumPoints()
PS := len(train) * ps
c := make([]float64, len(guess))
var cd callback_data
cd.Train = train
cd.Test = test
cd.E = e
cd.Coeff = c
cd.Task = task
cd.J = make([]expr.Expr, len(guess))
for i, _ := range cd.J {
deriv := e.DerivConst(i)
// simp := deriv.Simplify(expr.DefaultRules())
cd.J[i] = deriv
}
// c/levmar inputs
coeff := make([]C.double, len(guess))
for i, g := range guess {
coeff[i] = C.double(g)
}
y := make([]C.double, PS)
for i1, T := range train {
for i2, p := range T.Points() {
i := i1*ps + i2
y[i] = C.double(p.Depnd(searchDim))
}
}
ya := (*C.double)(unsafe.Pointer(&y[0]))
ca := (*C.double)(unsafe.Pointer(&coeff[0]))
ni := C.int(PS)
mi := C.int(len(c))
// C.levmar_dif(ya, ca, mi, ni, unsafe.Pointer(&cd))
C.levmar_der(ya, ca, mi, ni, unsafe.Pointer(&cd))
for i, _ := range coeff {
c[i] = float64(coeff[i])
}
return c
}
//export Callback_func
func Callback_func(p, x *C.double, e unsafe.Pointer) {
cd := *(*callback_data)(e)
eqn := cd.E
coeff := cd.Coeff
M1 := len(cd.Train)
M2 := cd.Train[0].NumPoints()
M3 := len(coeff)
M23 := M2 * M3
MA := M1 * M23
var p_go []C.double
p_head := (*reflect.SliceHeader)((unsafe.Pointer(&p_go)))
p_head.Cap = M3
p_head.Len = M3
p_head.Data = uintptr(unsafe.Pointer(p))
for i, _ := range p_go {
coeff[i] = float64(p_go[i])
}
var x_go []C.double
x_head := (*reflect.SliceHeader)((unsafe.Pointer(&x_go)))
x_head.Cap = MA
x_head.Len = MA
x_head.Data = uintptr(unsafe.Pointer(x))
N := len(cd.Train)
var out float64
for i1, PS := range cd.Train {
for i2, pnt := range PS.Points() {
i := i1*N + i2
if cd.Task == ExprBenchmark {
out = eqn.Eval(0, pnt.Indeps(), coeff, PS.SysVals())
} else if cd.Task == ExprDiffeq {
out = eqn.Eval(pnt.Indep(0), pnt.Indeps()[1:], coeff, PS.SysVals())
}
x_go[i] = C.double(out)
}
}
}
//export Callback_jacfunc
func Callback_jacfunc(p, x *C.double, e unsafe.Pointer) {
cd := *(*callback_data)(e)
coeff := cd.Coeff
M1 := len(cd.Train)
M2 := cd.Train[0].NumPoints()
M3 := len(coeff)
M23 := M2 * M3
MA := M1 * M23
var p_go []C.double
p_head := (*reflect.SliceHeader)((unsafe.Pointer(&p_go)))
p_head.Cap = M3
p_head.Len = M3
p_head.Data = uintptr(unsafe.Pointer(p))
for i, _ := range p_go {
coeff[i] = float64(p_go[i])
}
var x_go []C.double
x_head := (*reflect.SliceHeader)((unsafe.Pointer(&x_go)))
x_head.Cap = MA
x_head.Len = MA
x_head.Data = uintptr(unsafe.Pointer(x))
var out float64
for i1, PS := range cd.Train {
for i2, pnt := range PS.Points() {
i := i1*M23 + i2*M3
for ji, eqn := range cd.J {
if cd.Task == ExprBenchmark {
out = eqn.Eval(0, pnt.Indeps(), coeff, PS.SysVals())
} else if cd.Task == ExprDiffeq {
out = eqn.Eval(pnt.Indep(0), pnt.Indeps()[1:], coeff, PS.SysVals())
}
x_go[i+ji] = C.double(out)
}
}
}
}
func StackLevmarExpr(e expr.Expr, x_dims int, coeff []float64, c_ygiven, c_input []C_double) []float64 {
// fmt.Printf("Entering Stack Levmar: \n")
c_coeff := make([]C.double, len(coeff))
for i, c := range coeff {
c_coeff[i] = C.double(c)
}
// c_ygiven := make([]C.double, len(ygiven))
// for i, c := range ygiven {
// c_ygiven[i] = C.double(c)
// }
// c_input := make([]C.double, len(input))
// for i, c := range input {
// c_input[i] = C.double(c)
// }
cp := (*C.double)(unsafe.Pointer(&c_coeff[0]))
mi := C.int(len(coeff))
yp := (*C.double)(unsafe.Pointer(&c_ygiven[0]))
ni := C.int(len(c_ygiven))
var sd *C.StackData
sd = new(C.StackData)
// fmt.Printf("x_len: %d x_dim: %d\n", len(input), x_dims)
sd.x_len = C.int(len(c_input))
sd.x_dim = C.int(x_dims)
sd.x_data = (*C.double)(unsafe.Pointer(&c_input[0]))
serial := make([]int, 0)
serial = e.StackSerial(serial)
// fmt.Printf("StackSerial: %v\n", serial)
c_serial := make([]C.int, len(serial))
for i, I := range serial {
c_serial[i] = C.int(I)
}
sd.expr.serial = (*C.int)(unsafe.Pointer(&c_serial[0]))
sd.expr.s_len = C.int(len(serial))
// fmt.Printf("GOT HERE: %v\n", serial)
derivs := make([]C.StackExpr, len(coeff))
for i, _ := range coeff {
deriv := e.DerivConst(i)
dserial := make([]int, 0)
dserial = deriv.StackSerial(dserial)
d_serial := make([]C.int, len(dserial))
for i, I := range dserial {
d_serial[i] = C.int(I)
}
derivs[i].serial = (*C.int)(unsafe.Pointer(&d_serial[0]))
derivs[i].s_len = C.int(len(d_serial))
}
sd.derivs = (*C.StackExpr)(unsafe.Pointer(&derivs[0]))
sd.d_len = C.int(mi)
// fmt.Printf("Going into stack_levmar_dif\n")
C.stack_levmar_dif(yp, cp, mi, ni, unsafe.Pointer(sd))
// C.stack_levmar_der(yp, cp, mi, ni, unsafe.Pointer(sd))
// fmt.Printf("Returned from stack_levmar_dif\n")
c := make([]float64, len(c_coeff))
for i, _ := range c_coeff {
c[i] = float64(c_coeff[i])
}
// fmt.Printf("C0: %f\n", c[0])
return c
}
// ./pge1 -pcfg=prob/bench/Koza_1.cfg -peel=3 -iter=100 -init=method1 -grow=method1