Example #1
1
File: get.go Project: postfix/hdf5
// Get reads data from the file.
func (f *File) Get(name string, something interface{}) error {
	value := reflect.ValueOf(something)
	if value.Kind() != reflect.Ptr {
		return errors.New("expected a pointer")
	}

	value = reflect.Indirect(value)

	cname := C.CString(name)
	defer C.free(unsafe.Pointer(cname))

	did := C.H5Dopen2(f.fid, cname, C.H5P_DEFAULT)
	if did < 0 {
		return errors.New("cannot find the dataset")
	}
	defer C.H5Dclose(did)

	object := newObject()
	defer object.free()

	object.tid = C.H5Dget_type(did)
	if object.tid < 0 {
		return errors.New("cannot get the datatype of the dataset")
	}

	if err := initializeToGet(object, value); err != nil {
		return err
	}

	if C.H5Dread(did, object.tid, C.H5S_ALL, C.H5S_ALL, C.H5P_DEFAULT, object.data) < 0 {
		return errors.New("cannot read the dataset from the file")
	}

	if err := finalizeToGet(object, value); err != nil {
		return err
	}

	one := C.hsize_t(1)
	sid := C.H5Screate_simple(1, (*C.hsize_t)(unsafe.Pointer(&one)), nil)
	if sid < 0 {
		return errors.New("cannot create a data space")
	}
	defer C.H5Sclose(sid)

	if C.H5Dvlen_reclaim(object.tid, sid, C.H5P_DEFAULT, object.data) < 0 {
		return errors.New("cannot reclaim memory")
	}

	return nil
}
Example #2
0
// Type returns an identifier for a copy of the datatype for a dataset.
func (t *Table) Type() (*Datatype, error) {
	hid := C.H5Dget_type(t.id)
	if err := checkID(hid); err != nil {
		return nil, err
	}
	return NewDatatype(hid), nil
}
Example #3
0
// Datatype returns the HDF5 Datatype of the Dataset
func (s *Dataset) Datatype() (*Datatype, error) {
	dtype_id := C.H5Dget_type(s.id)
	if dtype_id < 0 {
		return nil, fmt.Errorf("couldn't open Datatype from Dataset %q", s.Name())
	}
	return NewDatatype(dtype_id), nil
}
Example #4
0
// Type returns an identifier for a copy of the datatype for a dataset.
func (t *Table) Type() (*Datatype, error) {
	hid := C.H5Dget_type(t.id)
	err := h5err(C.herr_t(int(hid)))
	if err != nil {
		return nil, err
	}
	return copyDatatype(hid)
}
Example #5
0
// Returns an identifier for a copy of the datatype for a dataset.
// hid_t H5Dget_type(hid_t dataset_id )
func (t *Table) Type() (*DataType, error) {
	hid := C.H5Dget_type(t.id)
	err := togo_err(C.herr_t(int(hid)))
	if err != nil {
		return nil, err
	}
	dt := new_dtype(hid, nil)
	return dt, err
}
Example #6
0
File: h5d.go Project: pauh/go-hdf5
// Returns an identifier for a copy of the datatype for a dataset.
// hid_t H5Dget_type(hid_t dataset_id )
func (s *Dataset) Type() (*Datatype, error) {
	hid := C.H5Dget_type(s.id)
	err := h5err(C.herr_t(int(hid)))
	if err != nil {
		return nil, err
	}
	dt := NewDatatype(hid, nil)
	return dt, err
}