// CheckDREAMMV3DXitems checks the presence of the correct dx files/symlinks // in a given viz iteration directory. // NOTE: lastProperty could refer to molecule orientations or regions for meshes func CheckDREAMMV3DXItems(iter, lastPos, lastProperty, lastState int, hadFrame bool, fileTemplate string) error { pos := -1 if lastPos >= 0 { pos = lastPos } else if lastProperty >= 0 { pos = lastProperty } else if lastState >= 0 { pos = lastState } fileName := fmt.Sprintf(fileTemplate, iter) if hadFrame { ok, err := file.IsNonEmpty(fileName) if err != nil { return err } if !ok { return fmt.Errorf("file %s is non non-empty as expected", fileName) } } else if pos >= 0 { fileTemplate := filepath.Join("../iteration_%d", filepath.Base(fileName)) linkName := fmt.Sprintf(fileTemplate, pos) ok, err := file.IsSymLink(linkName, fileName) if err != nil { return err } if !ok { return fmt.Errorf("file %s is not properly symlinked to %s as expected", fileName, linkName) } } else { ok, err := file.NoFile(fileName) if err != nil { return err } if !ok { return fmt.Errorf("file %s exists but was expected to not be present", fileName) } } return nil }
// CheckDREAMMV2IterItems examines the viz iterations directory for // a specific items (surface positions, orientations, etc.) func CheckDREAMMV3IterItems(molSet, molIters *set.IntSet, iter, lastPos int, isEmpty bool, fileTemplate string) error { fileName := fmt.Sprintf(fileTemplate, iter) if molSet.Contains(iter) { if isEmpty { ok, err := file.Exists(fileName) if err != nil { return err } else if !ok { return fmt.Errorf("file %s does not exists", fileName) } } else { ok, err := file.IsNonEmpty(fileName) if err != nil { return err } else if !ok { return fmt.Errorf("file %s is not non-empty as expected", fileName) } } } else if lastPos >= 0 && !molIters.Contains(iter) { fileTemplate := filepath.Join("../iteration_%d", filepath.Base(fileName)) linkName := fmt.Sprintf(fileTemplate, lastPos) ok, err := file.IsSymLink(linkName, fileName) if err != nil { return err } else if !ok { return fmt.Errorf("file %s is not properly symlinked to %s", fileName, linkName) } } else { ok, err := file.NoFile(fileName) if err != nil { return err } else if !ok { return fmt.Errorf("file %s exists but shouldn't", fileName) } } return nil }