Example #1
0
func runRefTest(A *matrix.FloatMatrix, ntest, LB int) time.Duration {

	var mintime time.Duration

	N := A.Cols()
	tau := matrix.FloatZeros(N, 1)

	fnc := func() {
		ERRlapack = lapack.Geqrf(A, tau)
	}

	A0 := A.Copy()
	for n := 0; n < ntest; n++ {
		if n > 0 {
			// restore original A
			A0.CopyTo(A)
			tau.Scale(0.0)
		}
		mperf.FlushCache()
		time0 := mperf.Timeit(fnc)
		if n == 0 || time0 < mintime {
			mintime = time0
		}
	}
	return mintime
}
Example #2
0
func TestQRSmal(t *testing.T) {
	data := [][]float64{
		[]float64{12.0, -51.0, 4.0},
		[]float64{6.0, 167.0, -68.0},
		[]float64{-4.0, 24.0, -41.0}}

	A := matrix.FloatMatrixFromTable(data, matrix.RowOrder)
	T := matrix.FloatZeros(A.Cols(), A.Cols())
	T0 := T.Copy()

	M := A.Rows()
	//N := A.Cols()
	Tau := matrix.FloatZeros(M, 1)
	X, _ := DecomposeQR(A.Copy(), Tau, nil, 0)
	t.Logf("A\n%v\n", A)
	t.Logf("X\n%v\n", X)
	t.Logf("Tau\n%v\n", Tau)

	Tau0 := matrix.FloatZeros(M, 1)
	lapack.Geqrf(A, Tau0)
	t.Logf("lapack X\n%v\n", A)
	t.Logf("lapack Tau\n%v\n", Tau0)

	unblkQRBlockReflector(X, Tau, T)
	t.Logf("T:\n%v\n", T)

	V := TriLU(X.Copy())
	lapack.LarftFloat(V, Tau, T0)
	t.Logf("T0:\n%v\n", T0)

}
Example #3
0
// single invocation for matops and lapack functions
func runCheck(A *matrix.FloatMatrix, LB int) (bool, time.Duration, time.Duration) {

	var W *matrix.FloatMatrix = nil
	N := A.Cols()
	tau := matrix.FloatZeros(N, 1)
	if LB > 0 {
		W = matrix.FloatZeros(A.Rows(), LB)
	}
	fnc := func() {
		_, ERRmatops = matops.DecomposeQR(A, tau, W, LB)
	}

	if verbose && N < 10 {
		fmt.Fprintf(os.Stderr, "A start:\n%v\n", A)
	}
	A0 := A.Copy()
	tau0 := tau.Copy()

	mperf.FlushCache()
	time0 := mperf.Timeit(fnc)
	if verbose && N < 10 {
		fmt.Fprintf(os.Stderr, "A end:\n%v\n", A)
		tau.SetSize(1, N, 1)
		fmt.Fprintf(os.Stderr, "tau: %v\n", tau)
	}

	fn2 := func() {
		ERRlapack = lapack.Geqrf(A0, tau0)
	}

	mperf.FlushCache()
	time2 := mperf.Timeit(fn2)
	if verbose && N < 10 {
		fmt.Fprintf(os.Stderr, "A0 end:\n%v\n", A0)
		tau0.SetSize(1, N, 1) // row vector
		fmt.Fprintf(os.Stderr, "tau0: %v\n", tau0)
	}
	// now A == A0 && tau == tau0

	ok := A.AllClose(A0)
	oktau := tau.AllClose(tau0)
	if !ok || !oktau {
		// save result to globals
		Rlapack = A0
		Rmatops = A
		TAUlapack = tau0
		TAUmatops = tau
	}
	return ok && oktau, time0, time2
}
Example #4
0
func TestQRBlk(t *testing.T) {
	M := 8
	N := 6
	nb := 2

	A := matrix.FloatUniform(M, N)
	Tau := matrix.FloatZeros(M, 1)
	Tz := matrix.FloatZeros(N, N)
	Tx := matrix.FloatZeros(N, N)

	DecomposeBlockSize(0)
	Z, _ := DecomposeQRT(A.Copy(), Tz, nil, 0)
	_ = Z

	DecomposeBlockSize(nb)
	//X, _ := DecomposeQR(A.Copy(), Tau, nil)
	X, _ := DecomposeQRT(A.Copy(), Tx, nil, nb)

	Tau0 := matrix.FloatZeros(M, 1)
	A0 := A.Copy()
	lapack.Geqrf(A0, Tau0)
	ok := X.AllClose(A0)
	var dx matrix.FloatMatrix
	dx.DiagOf(Tx)
	//okt := Tau.AllClose(Tau0)
	okt := true
	_ = Tau
	t.Logf("lapack QR == DecomposeQR: %v\n", ok && okt)
	if !ok || !okt || true {
		t.Logf("A0: %d, %d, %d\n", A0.Rows(), A0.Cols(), A0.LeadingIndex())
		t.Logf("A\n%v\n", A)
		t.Logf("X\n%v\n", X)
		t.Logf("Tz\n%v\n", Tz)
		t.Logf("Tx\n%v\n", Tx)
		t.Logf("Tau\n%v\n", &dx)
		t.Logf("lapack X\n%v\n", A0)
		t.Logf("lapack Tau\n%v\n", Tau0)
	}
}
Example #5
0
func TestQRT(t *testing.T) {
	M := 6
	N := 5

	var Tau matrix.FloatMatrix
	A := matrix.FloatUniform(M, N)
	T := matrix.FloatZeros(A.Cols(), A.Cols())
	T0 := T.Copy()

	X, _ := DecomposeQRT(A.Copy(), T, nil, 0)
	Tau.DiagOf(T)

	Tau0 := matrix.FloatZeros(M, 1)
	A0 := A.Copy()
	lapack.Geqrf(A0, Tau0)
	ok := X.AllClose(A0)
	okt := Tau.AllClose(Tau0)
	t.Logf("lapack QR == DecomposeQR: %v\n", ok && okt)
	if !ok || !okt {
		t.Logf("A0: %d, %d, %d\n", A0.Rows(), A0.Cols(), A0.LeadingIndex())
		t.Logf("A\n%v\n", A)
		t.Logf("X\n%v\n", X)
		t.Logf("Tau\n%v\n", &Tau)
		t.Logf("lapack X\n%v\n", A0)
		t.Logf("lapack Tau\n%v\n", Tau0)
	}

	// build block reflectors
	//unblkQRBlockReflector(X, Tau, T)
	V := TriLU(A0.Copy())
	lapack.LarftFloat(V, Tau0, T0)

	ok = T0.AllClose(T)
	t.Logf("lapack.dlarft == QRBlockReflector: %v\n", ok)
	if !ok {
		t.Logf("T:\n%v\n", T)
		t.Logf("lapack T0:\n%v\n", T0)
	}
}