Exemple #1
0
func main() {
	fasInp := util.Arg(0)
	fmapOut := util.Arg(1)

	fmap := util.GetFmap(fasInp)
	util.FmapWrite(util.CreateFile(fmapOut), fmap)
}
Exemple #2
-1
func main() {
	outDir := util.Arg(0)
	fasInps := util.Args()[1:]

	util.Assert(os.MkdirAll(outDir, 0777))

	fastaChan := make(chan string)
	wg := new(sync.WaitGroup)
	for i := 0; i < max(1, runtime.GOMAXPROCS(0)); i++ {
		go func() {
			wg.Add(1)
			for fasta := range fastaChan {
				util.Verbosef("Computing map for '%s'...", fasta)
				fmap := util.GetFmap(fasta)
				outF := path.Join(outDir, fmt.Sprintf("%s.fmap", fmap.Name))
				util.FmapWrite(util.CreateFile(outF), fmap)
			}
			wg.Done()
		}()
	}

	for _, fasta := range fasInps {
		fastaChan <- fasta
	}

	close(fastaChan)
	wg.Wait()
}