// BuildWriteConcern takes a string and a NodeType indicating the type of node the write concern
// is intended to be used against, and converts the write concern string argument into an
// mgo.Safe object that's usable on sessions for that node type.
func BuildWriteConcern(writeConcern string, nodeType NodeType) (*mgo.Safe, error) {
sessionSafety, err := constructWCObject(writeConcern)
if err != nil {
return nil, err
}
if sessionSafety == nil {
log.Logf(log.DebugLow, "using unacknowledged write concern")
return nil, nil
}
// for standalone mongods, set the default write concern to 1
if nodeType == Standalone {
log.Logf(log.DebugLow, "standalone server: setting write concern %v to 1", w)
sessionSafety.W = 1
sessionSafety.WMode = ""
}
var writeConcernStr interface{}
if sessionSafety.WMode != "" {
writeConcernStr = sessionSafety.WMode
} else {
writeConcernStr = sessionSafety.W
}
log.Logf(log.Info, "using write concern: %v='%v', %v=%v, %v=%v, %v=%v",
w, writeConcernStr,
j, sessionSafety.J,
fSync, sessionSafety.FSync,
wTimeout, sessionSafety.WTimeout,
)
return sessionSafety, nil
}
// handleBSONInsteadOfDirectory updates -d and -c settings based on
// the path to the BSON file passed to mongorestore. This is only
// applicable if the target path points to a .bson file.
//
// As an example, when the user passes 'dump/mydb/col.bson', this method
// will infer that 'mydb' is the database and 'col' is the collection name.
func (restore *MongoRestore) handleBSONInsteadOfDirectory(path string) error {
// we know we have been given a non-directory, so we should handle it
// like a bson file and infer as much as we can
if restore.ToolOptions.Collection == "" {
// if the user did not set -c, use the file name for the collection
newCollectionName, fileType := restore.getInfoFromFilename(path)
if fileType != BSONFileType {
return fmt.Errorf("file %v does not have .bson extension", path)
}
restore.ToolOptions.Collection = newCollectionName
log.Logf(log.DebugLow, "inferred collection '%v' from file", restore.ToolOptions.Collection)
}
if restore.ToolOptions.DB == "" {
// if the user did not set -d, use the directory containing the target
// file as the db name (as it would be in a dump directory). If
// we cannot determine the directory name, use "test"
dirForFile := filepath.Base(filepath.Dir(path))
if dirForFile == "." || dirForFile == ".." {
dirForFile = "test"
}
restore.ToolOptions.DB = dirForFile
log.Logf(log.DebugLow, "inferred db '%v' from the file's directory", restore.ToolOptions.DB)
}
return nil
}
// dumpQueryToWriter takes an mgo Query, its intent, and a writer, performs the query,
// and writes the raw bson results to the writer. Returns a final count of documents
// dumped, and any errors that occured.
func (dump *MongoDump) dumpQueryToWriter(
query *mgo.Query, intent *intents.Intent) (int64, error) {
var total int
var err error
if len(dump.query) == 0 {
total, err = query.Count()
if err != nil {
return int64(0), fmt.Errorf("error reading from db: %v", err)
}
log.Logf(log.DebugLow, "counted %v %v in %v", total, docPlural(int64(total)), intent.Namespace())
} else {
log.Logf(log.DebugLow, "not counting query on %v", intent.Namespace())
}
dumpProgressor := progress.NewCounter(int64(total))
bar := &progress.Bar{
Name: intent.Namespace(),
Watching: dumpProgressor,
BarLength: progressBarLength,
}
dump.progressManager.Attach(bar)
defer dump.progressManager.Detach(bar)
err = dump.dumpIterToWriter(query.Iter(), intent.BSONFile, dumpProgressor)
_, dumpCount := dumpProgressor.Progress()
return dumpCount, err
}
// determineOplogCollectionName uses a command to infer
// the name of the oplog collection in the connected db
func (dump *MongoDump) determineOplogCollectionName() error {
session := dump.SessionProvider.GetSession()
masterDoc := bson.M{}
err := session.Run("isMaster", &masterDoc)
if err != nil {
return fmt.Errorf("error running command: %v", err)
}
if _, ok := masterDoc["hosts"]; ok {
log.Logf(2, "determined cluster to be a replica set")
log.Logf(3, "oplog located in local.oplog.rs")
dump.oplogCollection = "oplog.rs"
return nil
}
if isMaster := masterDoc["ismaster"]; util.IsFalsy(isMaster) {
log.Logf(1, "mongodump is not connected to a master")
return fmt.Errorf("not connected to master")
}
// TODO stop assuming master/slave, be smarter and check if it is really
// master/slave...though to be fair legacy mongodump doesn't do this either...
log.Logf(2, "not connected to a replica set, assuming master/slave")
log.Logf(3, "oplog located in local.oplog.$main")
dump.oplogCollection = "oplog.$main"
return nil
}
// Dump handles some final options checking and executes MongoDump
func (dump *MongoDump) Dump() error {
err := dump.ValidateOptions()
if err != nil {
return fmt.Errorf("Bad Option: %v", err)
}
if dump.InputOptions.Query != "" {
// TODO, check for extended json support...
// gonna need to do some exploring later on, since im 95% sure
// this is undefined in the current tools
err = json.Unmarshal([]byte(dump.InputOptions.Query), &dump.query)
if err != nil {
return fmt.Errorf("error parsing query: %v", err)
}
}
if dump.OutputOptions.Out == "-" {
dump.useStdout = true
}
if dump.OutputOptions.DumpDBUsersAndRoles {
//first make sure this is possible with the connected database
dump.authVersion, err = auth.GetAuthVersion(dump.SessionProvider.GetSession())
if err != nil {
return fmt.Errorf("error getting auth schema version for dumpDbUsersAndRoles: %v", err)
}
log.Logf(2, "using auth schema version %v", dump.authVersion)
if dump.authVersion != 3 {
return fmt.Errorf("backing up users and roles is only supported for "+
"deployments with auth schema versions 3, found: %v", dump.authVersion)
}
}
//switch on what kind of execution to do
switch {
case dump.ToolOptions.DB == "" && dump.ToolOptions.Collection == "":
err = dump.DumpEverything()
case dump.ToolOptions.DB != "" && dump.ToolOptions.Collection == "":
err = dump.DumpDatabase(dump.ToolOptions.DB)
case dump.ToolOptions.DB != "" && dump.ToolOptions.Collection != "":
err = dump.DumpCollection(dump.ToolOptions.DB, dump.ToolOptions.Collection)
}
if dump.OutputOptions.DumpDBUsersAndRoles {
log.Logf(0, "dumping users and roles for %v", dump.ToolOptions.DB)
if dump.ToolOptions.DB == "admin" {
log.Logf(0, "skipping users/roles dump, already dumped admin database")
} else {
err = dump.DumpUsersAndRolesForDB(dump.ToolOptions.DB)
if err != nil {
return fmt.Errorf("error dumping users and roles: %v", err)
}
}
}
log.Logf(1, "done")
return err
}
// CreateIntentForCollection builds an intent for the given database and collection name
// along with a path to a .bson collection file. It searches the file's parent directory
// for a matching metadata file.
//
// This method is not called by CreateIntentsForDB,
// it is only used in the case where --db and --collection flags are set.
func (restore *MongoRestore) CreateIntentForCollection(db string, collection string, dir archive.DirLike) error {
log.Logf(log.DebugLow, "reading collection %v for database %v from %v",
collection, db, dir.Path())
// first make sure the bson file exists and is valid
_, err := dir.Stat()
if err != nil {
return err
}
if dir.IsDir() {
return fmt.Errorf("file %v is a directory, not a bson file", dir.Path())
}
baseName, fileType := restore.getInfoFromFilename(dir.Name())
if fileType != BSONFileType {
return fmt.Errorf("file %v does not have .bson extension", dir.Path())
}
// then create its intent
intent := &intents.Intent{
DB: db,
C: collection,
Size: dir.Size(),
Location: dir.Path(),
}
intent.BSONFile = &realBSONFile{path: dir.Path(), intent: intent, gzip: restore.InputOptions.Gzip}
// finally, check if it has a .metadata.json file in its folder
log.Logf(log.DebugLow, "scanning directory %v for metadata", dir.Name())
entries, err := dir.Parent().ReadDir()
if err != nil {
// try and carry on if we can
log.Logf(log.Info, "error attempting to locate metadata for file: %v", err)
log.Log(log.Info, "restoring collection without metadata")
restore.manager.Put(intent)
return nil
}
metadataName := baseName + ".metadata.json"
if restore.InputOptions.Gzip {
metadataName += ".gz"
}
for _, entry := range entries {
if entry.Name() == metadataName {
metadataPath := entry.Path()
log.Logf(log.Info, "found metadata for collection at %v", metadataPath)
intent.MetadataLocation = metadataPath
intent.MetadataFile = &realMetadataFile{path: metadataPath, intent: intent, gzip: restore.InputOptions.Gzip}
break
}
}
if intent.MetadataFile == nil {
log.Log(log.Info, "restoring collection without metadata")
}
restore.manager.Put(intent)
return nil
}
// Run creates and runs a parser with the Demultiplexer as a consumer
func (demux *Demultiplexer) Run() error {
parser := Parser{In: demux.In}
err := parser.ReadAllBlocks(demux)
if len(demux.outs) > 0 {
log.Logf(log.Always, "demux finishing when there are still outs (%v)", len(demux.outs))
}
log.Logf(log.DebugLow, "demux finishing (err:%v)", err)
return err
}
// RestoreIntents iterates through all of the intents stored in the IntentManager, and restores them.
func (restore *MongoRestore) RestoreIntents() error {
// start up the progress bar manager
restore.progressManager = progress.NewProgressBarManager(log.Writer(0), progressBarWaitTime)
restore.progressManager.Start()
defer restore.progressManager.Stop()
log.Logf(log.DebugLow, "restoring up to %v collections in parallel", restore.OutputOptions.NumParallelCollections)
if restore.OutputOptions.NumParallelCollections > 0 {
resultChan := make(chan error)
// start a goroutine for each job thread
for i := 0; i < restore.OutputOptions.NumParallelCollections; i++ {
go func(id int) {
log.Logf(log.DebugHigh, "starting restore routine with id=%v", id)
for {
intent := restore.manager.Pop()
if intent == nil {
log.Logf(log.DebugHigh, "ending restore routine with id=%v, no more work to do", id)
resultChan <- nil // done
return
}
err := restore.RestoreIntent(intent)
if err != nil {
resultChan <- fmt.Errorf("%v: %v", intent.Namespace(), err)
return
}
restore.manager.Finish(intent)
}
}(i)
}
// wait until all goroutines are done or one of them errors out
for i := 0; i < restore.OutputOptions.NumParallelCollections; i++ {
if err := <-resultChan; err != nil {
return err
}
}
return nil
}
// single-threaded
for {
intent := restore.manager.Pop()
if intent == nil {
return nil
}
err := restore.RestoreIntent(intent)
if err != nil {
return fmt.Errorf("%v: %v", intent.Namespace(), err)
}
restore.manager.Finish(intent)
}
return nil
}
// validateReaderFields is a helper to validate fields for input readers
func validateReaderFields(fields []string) error {
if err := validateFields(fields); err != nil {
return err
}
if len(fields) == 1 {
log.Logf(log.Info, "using field: %v", fields[0])
} else {
log.Logf(log.Info, "using fields: %v", strings.Join(fields, ","))
}
return nil
}
// handle logic for 'put' command.
func (mf *MongoFiles) handlePut(gfs *mgo.GridFS) (output string, err error) {
localFileName := mf.getLocalFileName(nil)
// check if --replace flag turned on
if mf.StorageOptions.Replace {
err := gfs.Remove(mf.FileName)
if err != nil {
return "", err
}
output = fmt.Sprintf("removed all instances of '%v' from GridFS\n", mf.FileName)
}
var localFile io.ReadCloser
if localFileName == "-" {
localFile = os.Stdin
} else {
localFile, err = os.Open(localFileName)
if err != nil {
return "", fmt.Errorf("error while opening local file '%v' : %v\n", localFileName, err)
}
defer localFile.Close()
log.Logf(log.DebugLow, "creating GridFS file '%v' from local file '%v'", mf.FileName, localFileName)
}
gFile, err := gfs.Create(mf.FileName)
if err != nil {
return "", fmt.Errorf("error while creating '%v' in GridFS: %v\n", mf.FileName, err)
}
defer func() {
// GridFS files flush a buffer on Close(), so it's important we
// capture any errors that occur as this function exits and
// overwrite the error if earlier writes executed successfully
if closeErr := gFile.Close(); err == nil && closeErr != nil {
log.Logf(log.DebugHigh, "error occurred while closing GridFS file handler")
err = fmt.Errorf("error while storing '%v' into GridFS: %v\n", localFileName, closeErr)
}
}()
// set optional mime type
if mf.StorageOptions.ContentType != "" {
gFile.SetContentType(mf.StorageOptions.ContentType)
}
n, err := io.Copy(gFile, localFile)
if err != nil {
return "", fmt.Errorf("error while storing '%v' into GridFS: %v\n", localFileName, err)
}
log.Logf(log.DebugLow, "copied %v bytes to server", n)
output += fmt.Sprintf("added file: %v\n", gFile.Name())
return output, nil
}
// DumpCollection dumps the specified database's collection
func (dump *MongoDump) DumpCollection(db, c string) error {
session := dump.SessionProvider.GetSession()
// in mgo, setting prefetch = 1.0 causes the driver to make requests for
// more results as soon as results are returned. This effectively
// duplicates the behavior of an exhaust cursor.
session.SetPrefetch(1.0)
var findQuery *mgo.Query
switch {
case len(dump.query) > 0:
findQuery = session.DB(db).C(c).Find(dump.query)
case dump.InputOptions.TableScan:
// ---forceTablesScan runs the query without snapshot enabled
findQuery = session.DB(db).C(c).Find(nil)
default:
findQuery = session.DB(db).C(c).Find(nil).Snapshot()
}
if dump.useStdout {
log.Logf(0, "writing %v.%v to stdout", db, c)
return dump.dumpQueryToWriter(findQuery, os.Stdout)
} else {
dbFolder := filepath.Join(dump.OutputOptions.Out, db)
err := os.MkdirAll(dbFolder, 0755)
if err != nil {
return fmt.Errorf("error creating directory `%v`: %v", dbFolder, err)
}
outFilepath := filepath.Join(dbFolder, fmt.Sprintf("%v.bson", c))
out, err := os.Create(outFilepath)
if err != nil {
return fmt.Errorf("error creating bson file `%v`: %v", outFilepath, err)
}
defer out.Close()
log.Logf(0, "writing %v.%v to %v", db, c, outFilepath)
err = dump.dumpQueryToWriter(findQuery, out)
if err != nil {
return err
}
metadataFilepath := filepath.Join(dbFolder, fmt.Sprintf("%v.metadata.json", c))
metaOut, err := os.Create(metadataFilepath)
if err != nil {
return fmt.Errorf("error creating metadata.json file `%v`: %v", outFilepath, err)
}
defer metaOut.Close()
log.Logf(0, "writing %v.%v metadata to %v", db, c, metadataFilepath)
return dump.dumpMetadataToWriter(db, c, metaOut)
}
}
// Convert implements the Converter interface for JSON input. It converts a
// JSONConverter struct to a BSON document.
func (c JSONConverter) Convert() (bson.D, error) {
document, err := json.UnmarshalBsonD(c.data)
if err != nil {
return nil, fmt.Errorf("error unmarshaling bytes on document #%v: %v", c.index, err)
}
log.Logf(log.DebugHigh, "got line: %v", document)
bsonD, err := bsonutil.GetExtendedBsonD(document)
if err != nil {
return nil, fmt.Errorf("error getting extended BSON for document #%v: %v", c.index, err)
}
log.Logf(log.DebugHigh, "got extended line: %#v", bsonD)
return bsonD, nil
}
// HeaderBSON is part of the ParserConsumer interface and receives headers from parser.
// Its main role is to implement opens and EOFs of the embedded stream.
func (demux *Demultiplexer) HeaderBSON(buf []byte) error {
colHeader := NamespaceHeader{}
err := bson.Unmarshal(buf, &colHeader)
if err != nil {
return newWrappedError("header bson doesn't unmarshal as a collection header", err)
}
log.Logf(log.DebugHigh, "demux namespaceHeader: %v", colHeader)
if colHeader.Collection == "" {
return newError("collection header is missing a Collection")
}
demux.currentNamespace = colHeader.Database + "." + colHeader.Collection
if _, ok := demux.outs[demux.currentNamespace]; !ok {
if demux.NamespaceChan != nil {
demux.NamespaceChan <- demux.currentNamespace
err := <-demux.NamespaceErrorChan
if err == io.EOF {
// if the Prioritizer sends us back an io.EOF then it's telling us that
// it's finishing and doesn't need any more namespace announcements.
close(demux.NamespaceChan)
demux.NamespaceChan = nil
return nil
}
if err != nil {
return newWrappedError("failed arranging a consumer for new namespace", err)
}
}
}
if colHeader.EOF {
crc := int64(demux.hashes[demux.currentNamespace].Sum64())
length := int64(demux.lengths[demux.currentNamespace])
if crc != colHeader.CRC {
return fmt.Errorf("CRC mismatch for namespace %v, %v!=%v",
demux.currentNamespace,
crc,
colHeader.CRC,
)
}
log.Logf(log.DebugHigh,
"demux checksum for namespace %v is correct (%v), %v bytes",
demux.currentNamespace, crc, length)
demux.outs[demux.currentNamespace].Close()
delete(demux.outs, demux.currentNamespace)
delete(demux.hashes, demux.currentNamespace)
delete(demux.lengths, demux.currentNamespace)
// in case we get a BSONBody with this block,
// we want to ensure that that causes an error
demux.currentNamespace = ""
}
return nil
}
func (dump *MongoDump) createIntentFromOptions(dbName string, ci *collectionInfo) error {
if dump.shouldSkipCollection(ci.Name) {
log.Logf(log.DebugLow, "skipping dump of %v.%v, it is excluded", dbName, ci.Name)
return nil
}
intent, err := dump.NewIntent(dbName, ci.Name)
if err != nil {
return err
}
intent.Options = ci.Options
dump.manager.Put(intent)
log.Logf(log.DebugLow, "enqueued collection '%v'", intent.Namespace())
return nil
}
// checkOplogTimestampExists checks to make sure the oplog hasn't rolled over
// since mongodump started. It does this by checking the oldest oplog entry
// still in the database and making sure it happened at or before the timestamp
// captured at the start of the dump.
func (dump *MongoDump) checkOplogTimestampExists(ts bson.MongoTimestamp) (bool, error) {
oldestOplogEntry := db.Oplog{}
err := dump.sessionProvider.FindOne("local", dump.oplogCollection, 0, nil, []string{"+$natural"}, &oldestOplogEntry, 0)
if err != nil {
return false, fmt.Errorf("unable to read entry from oplog: %v", err)
}
log.Logf(log.DebugHigh, "oldest oplog entry has timestamp %v", oldestOplogEntry.Timestamp)
if oldestOplogEntry.Timestamp > ts {
log.Logf(log.Info, "oldest oplog entry of timestamp %v is older than %v",
oldestOplogEntry.Timestamp, ts)
return false, nil
}
return true, nil
}
// Run executes the mongotop program.
func (mt *MongoTop) Run() error {
connURL := mt.Options.Host
if connURL == "" {
connURL = "127.0.0.1"
}
if mt.Options.Port != "" {
connURL = connURL + ":" + mt.Options.Port
}
hasData := false
numPrinted := 0
for {
if mt.OutputOptions.RowCount > 0 && numPrinted > mt.OutputOptions.RowCount {
return nil
}
numPrinted++
diff, err := mt.runDiff()
if err != nil {
// If this is the first time trying to poll the server and it fails,
// just stop now instead of trying over and over.
if !hasData {
return err
}
log.Logf(log.Always, "Error: %v\n", err)
time.Sleep(mt.Sleeptime)
}
// if this is the first time and the connection is successful, print
// the connection message
if !hasData && !mt.OutputOptions.Json {
log.Logf(log.Always, "connected to: %v\n", connURL)
}
hasData = true
if diff != nil {
if mt.OutputOptions.Json {
fmt.Println(diff.JSON())
} else {
fmt.Println(diff.Grid())
}
}
time.Sleep(mt.Sleeptime)
}
}
func GetCollections(database *mgo.Database, name string) (*mgo.Iter, bool, error) {
var cmdResult struct {
Cursor struct {
FirstBatch []bson.Raw "firstBatch"
NS string
Id int64
}
}
command := bson.D{{"listCollections", 1}, {"cursor", bson.M{}}}
if len(name) > 0 {
command = bson.D{{"listCollections", 1}, {"filter", bson.M{"name": name}}, {"cursor", bson.M{}}}
}
err := database.Run(command, &cmdResult)
switch {
case err == nil:
ns := strings.SplitN(cmdResult.Cursor.NS, ".", 2)
if len(ns) < 2 {
return nil, false, fmt.Errorf("server returned invalid cursor.ns `%v` on listCollections for `%v`: %v",
cmdResult.Cursor.NS, database.Name, err)
}
return database.Session.DB(ns[0]).C(ns[1]).NewIter(database.Session, cmdResult.Cursor.FirstBatch, cmdResult.Cursor.Id, nil), false, nil
case IsNoCmd(err):
log.Logf(log.DebugLow, "No support for listCollections command, falling back to querying system.namespaces")
iter, err := getCollectionsPre28(database, name)
return iter, true, err
default:
return nil, false, fmt.Errorf("error running `listCollections`. Database: `%v` Err: %v",
database.Name, err)
}
}
// Init performs preliminary setup operations for MongoDump.
func (dump *MongoDump) Init() error {
err := dump.ValidateOptions()
if err != nil {
return fmt.Errorf("bad option: %v", err)
}
dump.sessionProvider, err = db.NewSessionProvider(*dump.ToolOptions)
if err != nil {
return fmt.Errorf("can't create session: %v", err)
}
// allow secondary reads for the isMongos check
dump.sessionProvider.SetFlags(db.Monotonic)
dump.isMongos, err = dump.sessionProvider.IsMongos()
if err != nil {
return err
}
// ensure we allow secondary reads on mongods and disable TCP timeouts
flags := db.DisableSocketTimeout
if dump.isMongos {
log.Logf(log.Info, "connecting to mongos; secondary reads disabled")
} else {
flags |= db.Monotonic
}
dump.sessionProvider.SetFlags(flags)
// return a helpful error message for mongos --repair
if dump.OutputOptions.Repair && dump.isMongos {
return fmt.Errorf("--repair flag cannot be used on a mongos")
}
dump.manager = intents.NewIntentManager()
dump.progressManager = progress.NewProgressBarManager(log.Writer(0), progressBarWaitTime)
return nil
}
// CreateIntentForOplog creates an intent for a file that we want to treat as an oplog.
func (restore *MongoRestore) CreateIntentForOplog() error {
target, err := newActualPath(restore.InputOptions.OplogFile)
db := ""
collection := "oplog"
if err != nil {
return err
}
log.Logf(log.DebugLow, "reading oplog from %v", target.Path())
if target.IsDir() {
return fmt.Errorf("file %v is a directory, not a bson file", target.Path())
}
// Then create its intent.
intent := &intents.Intent{
DB: db,
C: collection,
Size: target.Size(),
Location: target.Path(),
}
intent.BSONFile = &realBSONFile{path: target.Path(), intent: intent, gzip: restore.InputOptions.Gzip}
restore.manager.PutOplogIntent(intent, "oplogFile")
return nil
}
// GetIndexes returns an iterator to thethe raw index info for a collection by
// using the listIndexes command if available, or by falling back to querying
// against system.indexes (pre-3.0 systems).
func GetIndexes(coll *mgo.Collection) (*mgo.Iter, error) {
var cmdResult struct {
Cursor struct {
FirstBatch []bson.Raw "firstBatch"
NS string
Id int64
}
}
err := coll.Database.Run(bson.D{{"listIndexes", coll.Name}, {"cursor", bson.M{}}}, &cmdResult)
switch {
case err == nil:
ns := strings.SplitN(cmdResult.Cursor.NS, ".", 2)
if len(ns) < 2 {
return nil, fmt.Errorf("server returned invalid cursor.ns `%v` on listIndexes for `%v`: %v",
cmdResult.Cursor.NS, coll.FullName, err)
}
ses := coll.Database.Session
return ses.DB(ns[0]).C(ns[1]).NewIter(ses, cmdResult.Cursor.FirstBatch, cmdResult.Cursor.Id, nil), nil
case IsNoCmd(err):
log.Logf(log.DebugLow, "No support for listIndexes command, falling back to querying system.indexes")
return getIndexesPre28(coll)
default:
return nil, fmt.Errorf("error running `listIndexes`. Collection: `%v` Err: %v", coll.FullName, err)
}
}
// Init performs preliminary setup operations for MongoDump.
func (dump *MongoDump) Init() error {
err := dump.ValidateOptions()
if err != nil {
return fmt.Errorf("bad option: %v", err)
}
if dump.stdout == nil {
dump.stdout = os.Stdout
}
dump.sessionProvider, err = db.NewSessionProvider(*dump.ToolOptions)
if err != nil {
return fmt.Errorf("can't create session: %v", err)
}
// temporarily allow secondary reads for the isMongos check
dump.sessionProvider.SetReadPreference(mgo.Nearest)
dump.isMongos, err = dump.sessionProvider.IsMongos()
if err != nil {
return err
}
if dump.isMongos && dump.OutputOptions.Oplog {
return fmt.Errorf("can't use --oplog option when dumping from a mongos")
}
var mode mgo.Mode
if dump.ToolOptions.ReplicaSetName != "" || dump.isMongos {
mode = mgo.Primary
} else {
mode = mgo.Nearest
}
var tags bson.D
if dump.InputOptions.ReadPreference != "" {
mode, tags, err = db.ParseReadPreference(dump.InputOptions.ReadPreference)
if err != nil {
return fmt.Errorf("error parsing --readPreference : %v", err)
}
if len(tags) > 0 {
dump.sessionProvider.SetTags(tags)
}
}
// warn if we are trying to dump from a secondary in a sharded cluster
if dump.isMongos && mode != mgo.Primary {
log.Logf(log.Always, db.WarningNonPrimaryMongosConnection)
}
dump.sessionProvider.SetReadPreference(mode)
dump.sessionProvider.SetTags(tags)
dump.sessionProvider.SetFlags(db.DisableSocketTimeout)
// return a helpful error message for mongos --repair
if dump.OutputOptions.Repair && dump.isMongos {
return fmt.Errorf("--repair flag cannot be used on a mongos")
}
dump.manager = intents.NewIntentManager()
dump.progressManager = progress.NewProgressBarManager(log.Writer(0), progressBarWaitTime)
return nil
}
// Watch spawns a goroutine to continuously collect and process stats for
// a single node on a regular interval. At each interval, the goroutine triggers
// the node's Report function with the 'discover' and 'out' channels.
func (node *NodeMonitor) Watch(sleep time.Duration, discover chan string, cluster ClusterMonitor) {
go func() {
cycle := uint64(0)
for {
sampleDiff := int64(sleep / time.Second)
log.Logf(log.DebugHigh, "polling server: %v", node.host)
statLine := node.Poll(discover, node.All, cycle%10 == 1, sampleDiff)
if statLine != nil {
log.Logf(log.DebugHigh, "successfully got statline from host: %v", node.host)
cluster.Update(*statLine)
}
time.Sleep(sleep)
cycle++
}
}()
}
// dumpQueryToWriter takes an mgo Query, its intent, and a writer, performs the query,
// and writes the raw bson results to the writer. Returns a final count of documents
// dumped, and any errors that occured.
func (dump *MongoDump) dumpQueryToWriter(
query *mgo.Query, intent *intents.Intent) (int64, error) {
total, err := query.Count()
if err != nil {
return int64(0), fmt.Errorf("error reading from db: %v", err)
}
log.Logf(log.Info, "\tcounted %v %v in %v", total, docPlural(int64(total)), intent.Namespace())
dumpProgressor := progress.NewCounter(int64(total))
bar := &progress.Bar{
Name: intent.Namespace(),
Watching: dumpProgressor,
BarLength: progressBarLength,
}
if dump.ProgressManager != nil {
dump.ProgressManager.Attach(bar)
defer dump.ProgressManager.Detach(bar)
}
err = dump.dumpIterToWriter(query.Iter(), intent.BSONFile, dumpProgressor)
_, dumpCount := dumpProgressor.Progress()
return dumpCount, err
}
// JSON iterates through the BSON file and for each document it finds,
// recursively descends into objects and arrays and prints the human readable
// JSON representation.
// It returns the number of documents processed and a non-nil error if one is
// encountered before the end of the file is reached.
func (bd *BSONDump) JSON() (int, error) {
numFound := 0
if bd.BSONSource == nil {
panic("Tried to call JSON() before opening file")
}
decodedStream := db.NewDecodedBSONSource(bd.BSONSource)
var result bson.Raw
for decodedStream.Next(&result) {
if err := printJSON(&result, bd.Out, bd.BSONDumpOptions.Pretty); err != nil {
log.Logf(log.Always, "unable to dump document %v: %v", numFound+1, err)
//if objcheck is turned on, stop now. otherwise keep on dumpin'
if bd.BSONDumpOptions.ObjCheck {
return numFound, err
}
} else {
_, err := bd.Out.Write([]byte("\n"))
if err != nil {
return numFound, err
}
}
numFound++
}
if err := decodedStream.Err(); err != nil {
return numFound, err
}
return numFound, nil
}
// DumpIntents iterates through the previously-created intents and
// dumps all of the found collections.
func (dump *MongoDump) DumpIntents() error {
resultChan := make(chan error)
var jobs int
if dump.ToolOptions != nil && dump.ToolOptions.HiddenOptions != nil {
jobs = dump.ToolOptions.HiddenOptions.MaxProcs
}
jobs = util.MaxInt(jobs, 1)
if jobs > 1 {
dump.manager.Finalize(intents.LongestTaskFirst)
} else {
dump.manager.Finalize(intents.Legacy)
}
log.Logf(log.Info, "dumping with %v job threads", jobs)
// start a goroutine for each job thread
for i := 0; i < jobs; i++ {
go func(id int) {
log.Logf(log.DebugHigh, "starting dump routine with id=%v", id)
for {
intent := dump.manager.Pop()
if intent == nil {
log.Logf(log.DebugHigh, "ending dump routine with id=%v, no more work to do", id)
resultChan <- nil
return
}
err := dump.DumpIntent(intent)
if err != nil {
resultChan <- err
return
}
dump.manager.Finish(intent)
}
}(i)
}
// wait until all goroutines are done or one of them errors out
for i := 0; i < jobs; i++ {
if err := <-resultChan; err != nil {
return err
}
}
return nil
}
// DumpIntents iterates through the previously-created intents and
// dumps all of the found collections.
func (dump *MongoDump) DumpIntents() error {
resultChan := make(chan error)
jobs := dump.OutputOptions.NumParallelCollections
if numIntents := len(dump.manager.Intents()); jobs > numIntents {
jobs = numIntents
}
if jobs > 1 {
dump.manager.Finalize(intents.LongestTaskFirst)
} else {
dump.manager.Finalize(intents.Legacy)
}
log.Logf(log.Info, "dumping up to %v collections in parallel", jobs)
// start a goroutine for each job thread
for i := 0; i < jobs; i++ {
go func(id int) {
log.Logf(log.DebugHigh, "starting dump routine with id=%v", id)
for {
intent := dump.manager.Pop()
if intent == nil {
log.Logf(log.DebugHigh, "ending dump routine with id=%v, no more work to do", id)
resultChan <- nil
return
}
err := dump.DumpIntent(intent)
if err != nil {
resultChan <- err
return
}
dump.manager.Finish(intent)
}
}(i)
}
// wait until all goroutines are done or one of them errors out
for i := 0; i < jobs; i++ {
if err := <-resultChan; err != nil {
return err
}
}
return nil
}
// runInsertionWorker is a helper to InsertDocuments - it reads document off
// the read channel and prepares then in batches for insertion into the databas
func (imp *MongoImport) runInsertionWorker(readDocs chan bson.D) (err error) {
session, err := imp.SessionProvider.GetSession()
if err != nil {
return fmt.Errorf("error connecting to mongod: %v", err)
}
defer session.Close()
if err = imp.configureSession(session); err != nil {
return fmt.Errorf("error configuring session: %v", err)
}
collection := session.DB(imp.ToolOptions.DB).C(imp.ToolOptions.Collection)
ignoreBlanks := imp.IngestOptions.IgnoreBlanks && imp.InputOptions.Type != JSON
var documentBytes []byte
var documents []bson.Raw
numMessageBytes := 0
readLoop:
for {
select {
case document, alive := <-readDocs:
if !alive {
break readLoop
}
// the mgo driver doesn't currently respect the maxBatchSize
// limit so we self impose a limit by using maxMessageSizeBytes
// and send documents over the wire when we hit the batch size
// or when we're at/over the maximum message size threshold
if len(documents) == imp.ToolOptions.BulkBufferSize || numMessageBytes >= maxMessageSizeBytes {
if err = imp.insert(documents, collection); err != nil {
return err
}
documents = documents[:0]
numMessageBytes = 0
}
// ignore blank fields if specified
if ignoreBlanks {
document = removeBlankFields(document)
}
if documentBytes, err = bson.Marshal(document); err != nil {
return err
}
if len(documentBytes) > maxBSONSize {
log.Logf(log.Always, "warning: attempting to insert document with size %v (exceeds %v limit)",
text.FormatByteAmount(int64(len(documentBytes))), text.FormatByteAmount(maxBSONSize))
}
numMessageBytes += len(documentBytes)
documents = append(documents, bson.Raw{3, documentBytes})
case <-imp.Dying():
return nil
}
}
// ingest any documents left in slice
if len(documents) != 0 {
return imp.insert(documents, collection)
}
return nil
}
// checkOplogTimestampExists checks to make sure the oplog hasn't rolled over
// since mongodump started. It does this by checking the oldest oplog entry
// still in the database and making sure it happened at or before the timestamp
// captured at the start of the dump.
func (dump *MongoDump) checkOplogTimestampExists(ts bson.MongoTimestamp) (bool, error) {
session := dump.SessionProvider.GetSession()
oldestOplogEntry := Oplog{}
collection := session.DB("local").C(dump.oplogCollection)
err := collection.Find(bson.M{}).Sort("$natural").Limit(1).One(&oldestOplogEntry)
if err != nil {
return false, fmt.Errorf("unable to read entry from oplog: %v", err)
}
log.Logf(3, "oldest oplog entry has timestamp %v", oldestOplogEntry.Timestamp)
if oldestOplogEntry.Timestamp > ts {
log.Logf(1, "oldest oplog entry of timestamp %v is older than %v",
oldestOplogEntry.Timestamp, ts)
return false, nil
}
return true, nil
}
// getSourceReader returns an io.Reader to read from the input source. Also
// returns a progress.Progressor which can be used to track progress if the
// reader supports it.
func (imp *MongoImport) getSourceReader() (io.ReadCloser, int64, error) {
if imp.InputOptions.File != "" {
file, err := os.Open(util.ToUniversalPath(imp.InputOptions.File))
if err != nil {
return nil, -1, err
}
fileStat, err := file.Stat()
if err != nil {
return nil, -1, err
}
log.Logf(log.Info, "filesize: %v bytes", fileStat.Size())
return file, int64(fileStat.Size()), err
}
log.Logf(log.Info, "reading from stdin")
// Stdin has undefined max size, so return 0
return os.Stdin, 0, nil
}
// AddMetadata adds a metadata data structure to a prelude and does the required bookkeeping.
func (prelude *Prelude) AddMetadata(cm *CollectionMetadata) {
prelude.NamespaceMetadatas = append(prelude.NamespaceMetadatas, cm)
if prelude.NamespaceMetadatasByDB == nil {
prelude.NamespaceMetadatasByDB = make(map[string][]*CollectionMetadata)
}
_, ok := prelude.NamespaceMetadatasByDB[cm.Database]
if !ok {
prelude.DBS = append(prelude.DBS, cm.Database)
}
prelude.NamespaceMetadatasByDB[cm.Database] = append(prelude.NamespaceMetadatasByDB[cm.Database], cm)
log.Logf(log.Info, "archive prelude %v.%v", cm.Database, cm.Collection)
}
