// Build the kmerindex for filtering.
func (p *PALS) BuildIndex() error {
p.notify("Indexing")
index, err := kmerindex.New(p.FilterParams.WordSize, p.target)
if err != nil {
return err
} else {
index.Build()
p.notify("Indexed")
}
p.index = index
p.hitFilter = filter.New(p.index, p.FilterParams)
return nil
}
// Share allows the receiver to use the index and parameters of m.
func (p *PALS) Share(m *PALS) {
p.index = m.index
p.FilterParams = m.FilterParams
p.DPParams = m.DPParams
p.hitFilter = filter.New(p.index, p.FilterParams)
}