func main() {
if len(os.Args) < 2 {
fmt.Println("no filename given")
return
}
if s, err := ioutil.ReadFile(os.Args[1]); err == nil {
fmt.Println(rosalind.Translate(string(s)))
}
}
func main() {
var lines [][]byte
var line []byte
var prefix bool
f, err := os.Open(os.Args[1]) // open file
if err != nil {
panic(err)
}
reader := bufio.NewReader(f)
reading:
for {
line, prefix, err = reader.ReadLine()
switch {
case err == io.EOF:
break reading
case prefix:
fmt.Println(line[:100])
panic("Line too long")
case len(line) == 0:
continue // skip empty line
default:
lines = append(lines, line)
}
}
gene := lines[0]
introns := lines[1:]
// sort.Sort(ByLength(introns))
for _, intron := range introns {
gene = rosalind.Splice(gene, intron)
}
asRNA := string(bytes.Replace(gene, []byte{'T'}, []byte{'U'}, -1))
fmt.Printf("%s\n", rosalind.Translate(asRNA))
}
