// String returns a string representation of the sequence data only.
func (s *QSeq) String() string {
cs := make([]alphabet.Letter, 0, len(s.Seq))
for _, ql := range s.Seq {
cs = append(cs, s.QFilter(s.Alpha, s.Threshold, ql))
}
return alphabet.Letters(cs).String()
}
// NewSeq creates a new Seq with the given id, letter sequence and alphabet.
func NewSeq(id string, b []alphabet.Letter, alpha alphabet.Alphabet) *Seq {
return &Seq{
Annotation: seq.Annotation{
ID: id,
Alpha: alpha,
Strand: seq.Plus,
},
Seq: append(alphabet.Letters(nil), b...),
}
}
// String returns a string representation of the sequence data only.
func (s *Seq) String() string { return alphabet.Letters(s.Seq).String() }
