func FIBD(filePath string) string {
data := bio.SequenceFromRosalindFile(filePath)
inputs := strings.Split(strings.Replace(data, "\n", "", -1), " ")
n, err := strconv.Atoi(inputs[0])
if err != nil {
// handle error
fmt.Println(err)
os.Exit(2)
}
k, err := strconv.Atoi(inputs[1])
if err != nil {
// handle error
fmt.Println(err)
os.Exit(2)
}
got := fmt.Sprintf("%d %d : %d\n", n, k, bio.Fibonaccid(n, k))
return got
}
func PROT(filePath string) string {
data := bio.SequenceFromRosalindFile(filePath)
sequence := strings.Replace(data, "\n", "", -1)
return bio.RNAtoPROTEIN(sequence)
}
func SUBS(filePath string) string {
data := strings.Split(bio.SequenceFromRosalindFile(filePath), "\n")
sequence := strings.Join(data[:len(data)-2], "")
fragment := data[len(data)-2]
indices := bio.Motifs(sequence, fragment)
got := ""
for i, value := range indices {
got = got + fmt.Sprintf("%d", value+1)
if i < len(indices)-1 {
got = got + " "
}
}
return got
}
func CONS(filePath string) string {
fastaData := bio.SequenceFromRosalindFile(filePath)
got := bio.Consensus(fastaData)
return got
}